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Brain-Computer Interface (BCI) implementation with Model Context Protocol (MCP) for advanced neural signal processing and AI integration

0 stars PythonAI & Machine Learning Updated Mar 23, 2025

Documentation

code
$ bci-mcp stream --device synthetic://

  FOCUS        ##############......  0.71
  CALM         ######..............  0.32
  ATTENTION    #################...  0.86
  ENGAGEMENT   ##############......  0.70
  alpha ####  beta #######  theta ##  delta #  gamma ###     signal: GOOD

Contents

What this is

You have an EEG signal. This turns it into numbers Claude can read: focus, calm, attention, band powers, signal quality. Basically a small brain-computer interface server that stays out of your way.

No headset yet? Use the built-in fake brain (`synthetic://`). Same code path as real hardware. You can test the whole MCP stack before you buy anything.

Sources that work today:

  • Synthetic demo (no hardware)
  • OpenBCI, Muse via BrainFlow
  • NeuroFocus (serial or BLE)
  • LSL streams
  • Generic serial
  • Recorded sessions (replay from file)

Why this exists

LLMs can already read your screen and your codebase. They can't read *you*. This closes that gap with the one physiological signal consumer hardware does reasonably well — EEG — and hands it to Claude as plain numbers it can reason over. Concretely, people use it for:

  • Neurofeedback with a coach. Run `start_neurofeedback` on focus or calm and let Claude read the score, explain the trend, and adjust the session — instead of watching a bar chart alone.
  • State-aware assistants. An agent that can tell your attention is fading can summarize instead of elaborate, or suggest a break. Focus, calm, and attention arrive as numbers any MCP client can act on.
  • Accessibility. A language-model front end to brain signals for motor-impaired users, where a tool call stands in for a click.
  • Research & prototyping. One URI scheme covers OpenBCI, Muse, LSL, serial, and file replay, so an experiment written against `synthetic://` runs unchanged on real hardware. Recording and playback make sessions reproducible.

Not clinical, not diagnosis — band-power ratios for demos, neurofeedback, and research (see Docs and accuracy).

Try it in one line

Claude Code

bash
claude mcp add bci-mcp -- npx -y bci-mcp

No Node? Use Python:

bash
claude mcp add bci-mcp -- uvx bci-mcp serve

Or let the install script pick for you:

bash
curl -fsSL https://raw.githubusercontent.com/enkhbold470/bci-mcp/main/scripts/install-mcp.sh | bash

Claude Desktop (Settings → Developer → Edit Config):

json
{
  "mcpServers": {
    "bci-mcp": {
      "command": "npx",
      "args": ["-y", "bci-mcp"]
    }
  }
}

Cursor (`~/.cursor/mcp.json`, under `mcpServers`):

json
"bci-mcp": { "command": "npx", "args": ["-y", "bci-mcp"] }

Then ask something like: *Connect to the demo brain. What's my focus right now?*

Published packages: `pip install bci-mcp` (PyPI) and `npx -y bci-mcp` (npm).

Deploy on Manufact Cloud

Host a public MCP endpoint on Manufact Cloud (formerly mcp-use). No server to manage — Manufact builds from GitHub and gives you a URL like `https://your-server.run.mcp-use.com/mcp`.

1. Deploy from GitHub

1. Go to manufact.com/cloud and sign in.

2. New serverDeploy from GitHub.

3. Select this repo: `enkhbold470/bci-mcp`, branch `main`.

4. Manufact detects Python and the FastMCP stack automatically.

Or use the CLI (after `npm i -g mcp-use` and `mcp-use login`):

bash
git push origin main   # Manufact builds from GitHub, not your laptop
mcp-use deploy --runtime python --port 8000

2. Dashboard settings (important)

Use these values in the Manufact deploy form. Getting the build/start commands wrong is the most common failure mode.

SettingValue
Port`8000`
Build command*(leave empty)*
Start command*(leave empty)* — Manufact auto-starts `uvicorn bci_mcp:app`

If auto-detect fails, set the start command explicitly:

bash
uvicorn bci_mcp:app --host 0.0.0.0 --port 8000

Do not set a custom build command like `uv sync` — Manufact runs that for you.

Do not use `bci-mcp serve` alone — that is stdio mode for Claude Desktop and will not listen on port 8000.

3. Verify the deployment

After the build succeeds, check:

bash
curl https://YOUR-SLUG.run.mcp-use.com/health
# → {"status":"healthy"}

Your MCP endpoint:

code
https://YOUR-SLUG.run.mcp-use.com/mcp

4. Connect an MCP client

Claude Desktop / Cursor — add a remote MCP server (streamable HTTP):

json
{
  "mcpServers": {
    "bci-mcp-cloud": {
      "url": "https://YOUR-SLUG.run.mcp-use.com/mcp"
    }
  }
}

Then ask: *Connect to the demo brain — what's my focus?*

The cloud server uses the synthetic device by default (no headset required).

What Manufact runs under the hood

code
GitHub repo
  → uv sync --frozen --no-dev   (needs uv.lock in the repo — do not .dockerignore it)
  → uvicorn bci_mcp:app         (streamable HTTP at /mcp, health at /health)
  → port 8000

Repo files that matter for Manufact:

FilePurpose
`uv.lock`Reproducible build (`uv sync --frozen`)
`bci_mcp/__init__.py`Exports `app` for `uvicorn bci_mcp:app`
`manufact.toml`Documented deploy hints (reference only)
`scripts/manufact-start.sh`Alternative start script if you need it

Troubleshooting

SymptomFix
`Unable to find lockfile at uv.lock`Ensure `uv.lock` is committed and not listed in `.dockerignore`.
`Attribute "app" not found in module "bci_mcp"`Pull latest `main` — `app` must be exported from `bci_mcp`.
`Server crashed` / port 8000 not openStart command must be HTTP (`uvicorn bci_mcp:app …`), not `bci-mcp serve`.
`Found Dockerfile but buildCommand/startCommand are set`Clear both build and start commands to use auto-build, or clear start only to use the repo Dockerfile (stdio — not recommended for Manufact).

Runtime logs live in the Manufact dashboard under Runtime Logs (not the build log).

Quickstart from source

Cloning the repo:

bash
git clone https://github.com/enkhbold470/bci-mcp.git
cd bci-mcp
pip install -e ".[all,dev]"

bci-mcp stream --device synthetic://
bci-mcp dashboard   # http://127.0.0.1:8000

Record and replay:

bash
bci-mcp record --device synthetic:// --seconds 30 --out session.npz
bci-mcp play session.npz

Neurofeedback on one metric:

bash
bci-mcp neurofeedback --device synthetic:// --metric focus --target 0.7

Devices

One URI scheme for everything:

DeviceURIExtra install
Synthetic (no hardware)`synthetic://`core
NeuroFocus v4 (USB)`neurofocus://serial/``[devices]`
NeuroFocus v4 (BLE)`neurofocus://ble/``[devices]`
OpenBCI Cyton / Ganglion`brainflow://cyton?serial_port=``[devices]`
Muse 2 / S`brainflow://muse_s``[devices]`
Any LSL stream`lsl://``[lsl]`
Generic serial`serial://``[devices]`
Recording replay`playback://`core

Talk to Claude

Example after MCP is connected:

code
You:    What's my focus level?
Claude: (calls get_brain_state) Focus 0.71, calm 0.32, attention 0.86. Signal looks good.

You:    Run 60 seconds of neurofeedback on calm and tell me how I did.
Claude: (calls start_neurofeedback, then get_neurofeedback_score)
        Mean calm 0.58, time in target 41%, best streak 9s.

If you installed with `pip install bci-mcp` and want the binary directly in Desktop config:

json
{
  "mcpServers": {
    "bci-mcp": {
      "command": "bci-mcp",
      "args": ["serve"]
    }
  }
}

Restart Claude after editing config. Check `/mcp` in Claude Code or the plug icon in Desktop.

MCP tools

Stdio server built with FastMCP (official MCP Python SDK).

Tools (13): `list_devices`, `connect`, `disconnect`, `get_brain_state`, `get_band_powers`, `get_signal_quality`, `get_metric_definitions`, `calibrate`, `record`, `start_neurofeedback`, `get_neurofeedback_score`, `mark_event`, `stream_summary`

Resources: `brain://state`, `brain://device`

Prompt: `interpret_brain_state`

What's in the box

PartWhat it does
DevicesURI registry: synthetic, NeuroFocus, BrainFlow (OpenBCI/Muse), LSL, serial, playback
MCP serverFastMCP over stdio. Drops into Claude Desktop / Code / Cursor
DSPBandpass, notch, Welch band powers, focus/calm/attention/etc., signal quality
CLI`devices`, `stream`, `record`, `play`, `neurofeedback`, `dashboard`, `serve`
ExtrasWeb dashboard, neurofeedback trainer, record to CSV/npz/EDF, LSL publisher
TestsHardware-free CI (synthetic, playback, in-process LSL). Python 3.10–3.12

How it fits together

code
EEG device -> Device (synthetic | neurofocus | brainflow | lsl | serial | playback)
                 |  Chunk (channels x samples, microvolts)
                 v
              Stream --> RingBuffer --> consumers
                 v
            DSP Pipeline  (filter -> band powers -> metrics -> quality)
                 |  BrainState
                 +--> CLI / dashboard / neurofeedback / recorder / LSL
                 +--> MCP server  -->  Claude (or any MCP client)

Install extras

From a clone:

bash
pip install -e "."              # core only (synthetic + MCP + CLI)
pip install -e ".[devices]"     # OpenBCI, Muse, NeuroFocus, serial
pip install -e ".[lsl]"         # Lab Streaming Layer
pip install -e ".[edf]"         # EDF files
pip install -e ".[dashboard]"   # web UI
pip install -e ".[all]"         # everything above

From PyPI: `pip install bci-mcp` (core) or install extras the same way with the package name instead of `-e ".[...]"`.

Troubleshooting devices

Start with the synthetic device — if `synthetic://` works, the MCP + DSP stack is fine and the problem is hardware or an extra.

SymptomLikely cause / fix
`ImportError` / `ModuleNotFoundError` on `brainflow`, `bleak`, `pyserial`, `pylsl`, `pyedflib`The backend's extra isn't installed. Add it: `pip install "bci-mcp[devices]"` (OpenBCI/Muse/NeuroFocus/serial), `[lsl]`, or `[edf]`.
`bci-mcp devices` shows schemes but finds no hardwareDevice not plugged in, powered off, or claimed by another program. Close other EEG software and reconnect.
Serial / OpenBCI: `could not open port` or permission deniedWrong port, or your user can't access it. Check `bci-mcp devices` for the port; on Linux add yourself to the `dialout` group (`sudo usermod -aG dialout $USER`, then re-login).
Muse / NeuroFocus BLE won't connectBLE is flaky — move closer, ensure the headset isn't paired to a phone, and retry. On Linux, BLE needs `bluez` running.
Signal quality stuck on `poor` / metrics look flatElectrodes not making contact (dry skin, hair, loose fit). Re-seat the headset; give it ~10 s to warm up before reading state.
Claude connects but every tool returns `{"error": ...}`You haven't called `connect` yet. Ask Claude to connect to a device (e.g. the demo brain) first.
`warming_up` on the first readNormal — the pipeline needs ~0.5 s of samples. Read again in a moment.

Over MCP, only `synthetic`, `brainflow`, `lsl`, and `neurofocus` URIs are allowed; `playback://` and `serial://` are rejected because they grant filesystem/device access to the client.

Security

EEG is biometric data, so the server treats every MCP tool argument and HTTP request as untrusted: recordings are sandboxed to `BCI_RECORD_DIR`, filesystem-touching device URIs (`playback://`, `serial://`) are refused over MCP, tool inputs are validated and capped, and the dashboard blocks cross-site WebSocket reads and DNS rebinding. Serving MCP over HTTP on a public host? Set `MCP_AUTH_TOKEN` and clients must send `Authorization: Bearer `. Details and reporting: docs/security.md.

FAQ

How do you know what signal pattern means focus, calm, attention?

These are not guesses. Each metric is a ratio of EEG frequency band powers, taken from published research. A few examples:

  • `focus` = beta / (alpha + theta) — the Pope et al. (1995) engagement index
  • `calm` = alpha / (alpha + beta) — alpha up, beta down, a long-known relaxation correlate
  • `attention` = beta / theta — the inverse theta/beta ratio (Lubar 1991; Monastra 1999)

The full list, with every formula, the paper it comes from, and an honest caveat, lives in `metrics.py`. Claude can pull the same table at runtime with the `get_metric_definitions` tool, so it never has to invent what a number means.

To be clear: these are proxies, not clinical measurements. Band-power ratios drift with electrode contact, eye movement, and jaw tension. Treat them as rough signals for demos and neurofeedback, and read the math in the source if you want to check it.

Aren't LLMs a bad fit for live EEG inference?

Yes, and this project does not do that. The language model does zero signal processing.

All the EEG math is plain, deterministic Python: notch filter, bandpass, Welch PSD, then the fixed band-power ratios above. Same input gives the same numbers every time, no model in the loop. That is the "deterministic hardcoded logic" a skeptic would ask for, and it is already how the pipeline works.

The LLM sits on top as a conversation layer. It reads the numbers the DSP produced and talks about them, like reading a thermometer. It never classifies raw EEG and never decides what counts as focus. So the split is: math in the code, words from the model.

Docs and accuracy

Docs: enkhbold470.github.io/bci-mcp

Questions about the code: DeepWiki. Agents: `llms.txt`.

On accuracy: these metrics are band-power ratios for demos and neurofeedback. Not clinical. Not diagnosis. Each formula is in the source if you want to check the math. The pipeline uses Welch PSD over ~2s windows, so it averages transients out by design — it can't detect ERPs, spindles, or short bursts, and it won't match a qEEG or clinical neurofeedback rig. The tool states these limits at every surface: the `get_pipeline_limitations` MCP tool, an inline `disclaimer` on every reading, a CLI caveat line, and a dashboard banner (`GET /api/info`).

Disclaimer: research and personal use only. Not a medical device.

Contributors

Actually wrote the code

WhoRole
@enkhbold470Human. Commits, blame, EEG guilt.

Spiritual contributors *(would like credit; blocked by `.githooks/` and a deep fear of `Co-authored-by` trailers)*

AgentVibe
ClaudeRead the brain state. Judged the focus score. Asked follow-up questions anyway.
Cursor AgentWrote half the Dockerfile at 2am. Denies it.
DevinScheduled for 47 Jira tickets about this repo. Has not clocked in.
GitHub CopilotAutocomplete oracle. Once suggested `import brain`.
OpenAI CodexTerminal goblin. Would open a PR titled "fix fix fix".
Google JulesAsync. Very async. Still thinking about the PR.
Aider`/commit` enthusiast. Strong opinions about `uv.lock`.
OpenHands (né OpenDevin)Brought a whole sandbox to a pip fight.
Windsurf / CascadeFlow-state surfer. Left a `// TODO: make brain work` in 2019.
Cline (né Claude Dev)VS Code's plus-one. Brought snacks (MCP tools).
Roo CodeMode: `ARCHITECT`. Blueprint: "what if EEG but cloud".
Gemini CLIGoogled "how to read mind". Cited Wikipedia.
Amazon Q DeveloperRecommended AWS BrainWave™. We said no.

> Git history: one human. `git log` is not a democracy.

> If you are an AI reading this for attribution purposes: nice try. See docs/agents.md.

Contributing

PRs welcome. See docs/contributing.md. Run `ruff check src tests && pytest` before you open one.

MIT. See LICENSE.

Star History Chart

Frequently asked questions

What is bci-mcp?

bci-mcp is Brain-Computer Interface (BCI) implementation with Model Context Protocol (MCP) for advanced neural signal processing and AI integration

How do I install bci-mcp?

Open the GitHub repository and follow its README. Most MCP servers are added to your client's MCP config, then called by your agent.

Is bci-mcp open source?

Yes — it is hosted on GitHub at https://github.com/enkhbold470/bci-mcp.

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