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Augmented-Nature

PDB-MCP-Server

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A Model Context Protocol (MCP) server that provides access to the Protein Data Bank (PDB) - the worldwide repository of information about the 3D structures of proteins, nucleic acids, and complex assemblies.

25 stars JavaScriptOthers Updated Jun 12, 2026
bioinformaticsdrug-discoverymcp-servermodel-context-protocolprotein-data-bankprotein-structure

No README could be loaded. View the project on GitHub for full documentation.

Frequently asked questions

What is PDB-MCP-Server?

PDB-MCP-Server is A Model Context Protocol (MCP) server that provides access to the Protein Data Bank (PDB) - the worldwide repository of information about the 3D structures of proteins, nucleic acids, and complex assemblies.

How do I install PDB-MCP-Server?

Open the GitHub repository and follow its README. Most MCP servers are added to your client's MCP config, then called by your agent.

Is PDB-MCP-Server open source?

Yes — it is hosted on GitHub at https://github.com/Augmented-Nature/PDB-MCP-Server and has 25 stars.

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